Chocolatey Community Coffee Break

Join the Chocolatey Team on our regular monthly stream where we discuss all things Community, what we do, how you can get involved and answer your Chocolatey questions.

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Chocolatey Product Spotlight

Join the Chocolatey Team on our regular monthly stream where we put a spotlight on the most recent Chocolatey product releases. You'll have a chance to have your questions answered in a live Ask Me Anything format.

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Announcing Chocolatey Central Management 0.10.0

Livestream from
Thursday, 06 October 2022

We recently released our largest update to Chocolatey Central Management so far. Join Gary and Steph to find out more about Chocolatey Central Management and the new features and fixes we've added to this release.

Watch On-Demand
Chocolatey and Intune Overview

Webinar Replay from
Wednesday, 30 March 2022

At Chocolatey Software we strive for simple, and teaching others. Let us teach you just how simple it could be to keep your 3rd party applications updated across your devices, all with Intune!

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Chocolatey For Business. In Azure. In One Click.

Livestream from
Thursday, 9 June 2022

Join James and Josh to show you how you can get the Chocolatey For Business recommended infrastructure and workflow, created, in Azure, in around 20 minutes.

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The Future of Chocolatey CLI

Livestream from
Thursday, 04 August 2022

Join Paul and Gary to hear more about the plans for the Chocolatey CLI in the not so distant future. We'll talk about some cool new features, long term asks from Customers and Community and how you can get involved!

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Hacktoberfest Tuesdays 2022

Livestreams from
October 2022

For Hacktoberfest, Chocolatey ran a livestream every Tuesday! Re-watch Cory, James, Gary, and Rain as they share knowledge on how to contribute to open-source projects such as Chocolatey CLI.

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Chocolatey Product Spotlight: Chocolatey 1.2.0 and Chocolatey Licensed Extension 5.0.0

Livestream from
Thursday, 03 November 2022

Join Paul and Gary for this months Chocolatey product livestream where we look at the latest release of Chocolatey 1.2.0, Chocolatey Licensed Extension 5.0.0 and shine a spotlight on the new hook scripts functionality. This opens up so many possibilities for Chocolatey CLI users!

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Chocolatey Coding Livestream

Livestream from
Tuesday, 29 November 2022

Join Josh as he adds the ability to manage Chocolatey GUI config and features with the Chocolatey Ansible Collection.

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Introduction into Chocolatey with Veeam

Webinar from
Tuesday, 13 December 2022

Join Gary, Paul, and Maurice as they introduce and demonstrate how to use Chocolatey! Questions will be answered live in an Ask Me Anything format.

Watch On-Demand

Downloads:

17,834

Downloads of v 5.2.4:

6,732

Last Update:

16 Dec 2020

Package Maintainer(s):

Software Author(s):

  • GSL Biotech LLC

Tags:

snapgene-viewer dna visualization

SnapGene Viewer

  • 1
  • 2
  • 3

5.2.4 | Updated: 16 Dec 2020

Downloads:

17,834

Downloads of v 5.2.4:

6,732

Maintainer(s):

Software Author(s):

  • GSL Biotech LLC

SnapGene Viewer 5.2.4

  • 1
  • 2
  • 3

All Checks are Passing

3 Passing Tests


Validation Testing Passed


Verification Testing Passed

Details

Scan Testing Successful:

No detections found in any package files

Details
Learn More

Deployment Method: Individual Install, Upgrade, & Uninstall

To install SnapGene Viewer, run the following command from the command line or from PowerShell:

>

To upgrade SnapGene Viewer, run the following command from the command line or from PowerShell:

>

To uninstall SnapGene Viewer, run the following command from the command line or from PowerShell:

>

Deployment Method:

NOTE

This applies to both open source and commercial editions of Chocolatey.

1. Enter Your Internal Repository Url

(this should look similar to https://community.chocolatey.org/api/v2/)


2. Setup Your Environment

1. Ensure you are set for organizational deployment

Please see the organizational deployment guide

2. Get the package into your environment

  • Open Source or Commercial:
    • Proxy Repository - Create a proxy nuget repository on Nexus, Artifactory Pro, or a proxy Chocolatey repository on ProGet. Point your upstream to https://community.chocolatey.org/api/v2/. Packages cache on first access automatically. Make sure your choco clients are using your proxy repository as a source and NOT the default community repository. See source command for more information.
    • You can also just download the package and push it to a repository Download

3. Copy Your Script

choco upgrade snapgene-viewer -y --source="'INTERNAL REPO URL'" [other options]

See options you can pass to upgrade.

See best practices for scripting.

Add this to a PowerShell script or use a Batch script with tools and in places where you are calling directly to Chocolatey. If you are integrating, keep in mind enhanced exit codes.

If you do use a PowerShell script, use the following to ensure bad exit codes are shown as failures:


choco upgrade snapgene-viewer -y --source="'INTERNAL REPO URL'" 
$exitCode = $LASTEXITCODE

Write-Verbose "Exit code was $exitCode"
$validExitCodes = @(0, 1605, 1614, 1641, 3010)
if ($validExitCodes -contains $exitCode) {
  Exit 0
}

Exit $exitCode

- name: Install snapgene-viewer
  win_chocolatey:
    name: snapgene-viewer
    version: '5.2.4'
    source: INTERNAL REPO URL
    state: present

See docs at https://docs.ansible.com/ansible/latest/modules/win_chocolatey_module.html.


chocolatey_package 'snapgene-viewer' do
  action    :install
  source   'INTERNAL REPO URL'
  version  '5.2.4'
end

See docs at https://docs.chef.io/resource_chocolatey_package.html.


cChocoPackageInstaller snapgene-viewer
{
    Name     = "snapgene-viewer"
    Version  = "5.2.4"
    Source   = "INTERNAL REPO URL"
}

Requires cChoco DSC Resource. See docs at https://github.com/chocolatey/cChoco.


package { 'snapgene-viewer':
  ensure   => '5.2.4',
  provider => 'chocolatey',
  source   => 'INTERNAL REPO URL',
}

Requires Puppet Chocolatey Provider module. See docs at https://forge.puppet.com/puppetlabs/chocolatey.


4. If applicable - Chocolatey configuration/installation

See infrastructure management matrix for Chocolatey configuration elements and examples.

NOTE

Private CDN cached downloads available for licensed customers. Never experience 404 breakages again! Learn more...

Package Approved

This package was approved as a trusted package on 16 Dec 2020.

Description

Would you like to move beyond hand-drawn plasmid maps?

SnapGene Viewer is revolutionary software that allows molecular biologists to create, browse, and share richly annotated DNA sequence files up to 1 Gb in length.

Visualize

  • Create a DNA sequence file by either entering a sequence, or importing a record from GenBank, or opening an annotated sequence stored in one of many common file formats.
  • Browse or print a DNA sequence and its annotations using customizable Map, Sequence, Enzymes, Features, Primers, and History views.
  • Search a DNA sequence to match either a DNA query, or a protein translation, or an annotation.
  • View and edit DNA sequence traces.

Annotate

  • Automatically annotate common features, or manually annotate coding sequences and other features.
  • Design and annotate primers for PCR, sequencing, or mutagenesis.
  • Identify open reading frames (ORFs) with a single mouse click.

Share

  • Export a plasmid map as an image, or export an annotated DNA sequence to GenBank format.
  • Freely share data with your colleagues or customers using the universally accessible SnapGene format.

tools\chocolateyinstall.ps1
$ErrorActionPreference = 'Stop'

$packageArgs = @{
  packageName    = $env:ChocolateyPackageName
  fileType       = 'exe'
  url            = 'https://cdn.snapgene.com/downloads/SnapGeneViewer/5.x/5.2/5.2.4/snapgene_viewer_5.2.4_win.exe'
  softwareName   = 'SnapGene Viewer'
  checksum       = 'aa3601005009e7046db6932472c463cff11acb42938f38cdf9f2933aba97c81532470238b766958881b910617d7791f6255cb686b32224fd08f8917a604593f7'
  checksumType   = 'sha512'
  silentArgs     = '/S'
  validExitCodes = @(0)
}

Install-ChocolateyPackage @packageArgs

Log in or click on link to see number of positives.

In cases where actual malware is found, the packages are subject to removal. Software sometimes has false positives. Moderators do not necessarily validate the safety of the underlying software, only that a package retrieves software from the official distribution point and/or validate embedded software against official distribution point (where distribution rights allow redistribution).

Chocolatey Pro provides runtime protection from possible malware.

Add to Builder Version Downloads Last Updated Status
SnapGene Viewer 5.2.3 142 Tuesday, November 24, 2020 Approved
SnapGene Viewer 5.2.2 157 Friday, November 6, 2020 Approved
SnapGene Viewer 5.2.1 134 Friday, October 30, 2020 Approved
SnapGene Viewer 5.2.0 140 Tuesday, October 13, 2020 Approved
SnapGene Viewer 5.1.7 139 Friday, October 9, 2020 Approved
SnapGene Viewer 4.2.11.20190125 531 Friday, January 25, 2019 Approved
SnapGene Viewer 4.2.11 3229 Saturday, December 22, 2018 Approved
SnapGene Viewer 4.2.9 237 Saturday, December 8, 2018 Approved
SnapGene Viewer 4.2.8 228 Thursday, December 6, 2018 Approved
SnapGene Viewer 4.2.7 211 Tuesday, December 4, 2018 Approved
SnapGene Viewer 4.2.6 266 Wednesday, October 3, 2018 Approved
SnapGene Viewer 4.2.5 247 Thursday, September 20, 2018 Approved
SnapGene Viewer 4.2.4 269 Saturday, August 18, 2018 Approved
SnapGene Viewer 4.2.3 252 Thursday, July 26, 2018 Approved
SnapGene Viewer 4.2.2 225 Friday, July 20, 2018 Approved
SnapGene Viewer 4.2.1 241 Friday, July 13, 2018 Approved
SnapGene Viewer 4.2.0 289 Tuesday, July 10, 2018 Approved
SnapGene Viewer 4.1.9 346 Monday, April 23, 2018 Approved
SnapGene Viewer 4.1.8 368 Wednesday, April 11, 2018 Approved
SnapGene Viewer 4.1.7 323 Tuesday, March 6, 2018 Approved
SnapGene Viewer 4.1.6 327 Thursday, February 22, 2018 Approved
SnapGene Viewer 4.1.5 328 Monday, February 5, 2018 Approved
SnapGene Viewer 4.1.4 369 Thursday, January 11, 2018 Approved
SnapGene Viewer 4.1.3 312 Saturday, December 23, 2017 Approved
SnapGene Viewer 4.1.2 328 Wednesday, December 6, 2017 Approved
SnapGene Viewer 4.1.1 351 Thursday, November 30, 2017 Approved
SnapGene Viewer 4.1.0 357 Wednesday, November 8, 2017 Approved
SnapGene Viewer 4.0.8 324 Friday, November 3, 2017 Approved
SnapGene Viewer 4.0.7 363 Sunday, October 22, 2017 Approved

This package has no dependencies.

Discussion for the SnapGene Viewer Package

Ground Rules:

  • This discussion is only about SnapGene Viewer and the SnapGene Viewer package. If you have feedback for Chocolatey, please contact the Google Group.
  • This discussion will carry over multiple versions. If you have a comment about a particular version, please note that in your comments.
  • The maintainers of this Chocolatey Package will be notified about new comments that are posted to this Disqus thread, however, it is NOT a guarantee that you will get a response. If you do not hear back from the maintainers after posting a message below, please follow up by using the link on the left side of this page or follow this link to contact maintainers. If you still hear nothing back, please follow the package triage process.
  • Tell us what you love about the package or SnapGene Viewer, or tell us what needs improvement.
  • Share your experiences with the package, or extra configuration or gotchas that you've found.
  • If you use a url, the comment will be flagged for moderation until you've been whitelisted. Disqus moderated comments are approved on a weekly schedule if not sooner. It could take between 1-5 days for your comment to show up.
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