Downloads:
102,230
Downloads of v 16.3.5:
53
Last Update:
14 Nov 2024
Package Maintainer(s):
Software Author(s):
- The Jmol Development Team
Tags:
jmol chemistry molecule rendering viewer javaJmol molecule viewer
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16.3.5 | Updated: 14 Nov 2024
Downloads:
102,230
Downloads of v 16.3.5:
53
Maintainer(s):
Software Author(s):
- The Jmol Development Team
Jmol molecule viewer 16.3.5
Legal Disclaimer: Neither this package nor Chocolatey Software, Inc. are affiliated with or endorsed by The Jmol Development Team. The inclusion of The Jmol Development Team trademark(s), if any, upon this webpage is solely to identify The Jmol Development Team goods or services and not for commercial purposes.
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All Checks are Passing
3 Passing Tests
Deployment Method: Individual Install, Upgrade, & Uninstall
To install Jmol molecule viewer, run the following command from the command line or from PowerShell:
To upgrade Jmol molecule viewer, run the following command from the command line or from PowerShell:
To uninstall Jmol molecule viewer, run the following command from the command line or from PowerShell:
Deployment Method:
This applies to both open source and commercial editions of Chocolatey.
1. Enter Your Internal Repository Url
(this should look similar to https://community.chocolatey.org/api/v2/)
2. Setup Your Environment
1. Ensure you are set for organizational deployment
Please see the organizational deployment guide
2. Get the package into your environment
Option 1: Cached Package (Unreliable, Requires Internet - Same As Community)-
Open Source or Commercial:
- Proxy Repository - Create a proxy nuget repository on Nexus, Artifactory Pro, or a proxy Chocolatey repository on ProGet. Point your upstream to https://community.chocolatey.org/api/v2/. Packages cache on first access automatically. Make sure your choco clients are using your proxy repository as a source and NOT the default community repository. See source command for more information.
- You can also just download the package and push it to a repository Download
-
Open Source
-
Download the package:
Download - Follow manual internalization instructions
-
-
Package Internalizer (C4B)
-
Run: (additional options)
choco download jmol --internalize --source=https://community.chocolatey.org/api/v2/
-
For package and dependencies run:
choco push --source="'INTERNAL REPO URL'"
- Automate package internalization
-
Run: (additional options)
3. Copy Your Script
choco upgrade jmol -y --source="'INTERNAL REPO URL'" [other options]
See options you can pass to upgrade.
See best practices for scripting.
Add this to a PowerShell script or use a Batch script with tools and in places where you are calling directly to Chocolatey. If you are integrating, keep in mind enhanced exit codes.
If you do use a PowerShell script, use the following to ensure bad exit codes are shown as failures:
choco upgrade jmol -y --source="'INTERNAL REPO URL'"
$exitCode = $LASTEXITCODE
Write-Verbose "Exit code was $exitCode"
$validExitCodes = @(0, 1605, 1614, 1641, 3010)
if ($validExitCodes -contains $exitCode) {
Exit 0
}
Exit $exitCode
- name: Install jmol
win_chocolatey:
name: jmol
version: '16.3.5'
source: INTERNAL REPO URL
state: present
See docs at https://docs.ansible.com/ansible/latest/modules/win_chocolatey_module.html.
chocolatey_package 'jmol' do
action :install
source 'INTERNAL REPO URL'
version '16.3.5'
end
See docs at https://docs.chef.io/resource_chocolatey_package.html.
cChocoPackageInstaller jmol
{
Name = "jmol"
Version = "16.3.5"
Source = "INTERNAL REPO URL"
}
Requires cChoco DSC Resource. See docs at https://github.com/chocolatey/cChoco.
package { 'jmol':
ensure => '16.3.5',
provider => 'chocolatey',
source => 'INTERNAL REPO URL',
}
Requires Puppet Chocolatey Provider module. See docs at https://forge.puppet.com/puppetlabs/chocolatey.
4. If applicable - Chocolatey configuration/installation
See infrastructure management matrix for Chocolatey configuration elements and examples.
This package was approved as a trusted package on 14 Nov 2024.
Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry.
Features
- Free, open-source software licensed under the GNU Lesser General Public License
- Applet, Application, and Systems Integration Component*
- Multi-language
- Cross-platform
- Supports all major web browsers: Internet Explorer, Mozilla and Firefox, Safari, Google Chrome, Opera, Konqueror, IceWeasel, ...
- High-performance 3D rendering with no hardware requirements
- Files which are compressed with gzip will automatically be decompressed
- Animations
- Vibrations
- Surfaces
- Orbitals
- Support for unit cell and symmetry operations
- Schematic shapes for secondary structures in biomolecules
- Measurements of distance, angle, torsion angle
- Support for RasMol/Chime scripting language
- JavaScript support library (Jmol.js)
- Exports to jpg, png, gif, ppm, pdf, POV-Ray, Gaussian, Maya, vrml, x3d, idtf, web page.
Many supported file formats (see also the file formats section within Jmol Wiki):
- MOL MDL / Elsevier / Symyx structure (classic version V2000)
- V3000 MDL / Elsevier / Symyx structure (new version V3000)
- SDF MDL / Elsevier / Symyx structure (multiple models)
- CTFile MDL / Elsevier / Symyx chemical table (generic)
- CIF Crystallographic Information File - standard from the International Union of Crystallography
- mmCIF Macromolecular Crystallographic Information File - standard from the International Union of Crystallography
- CML Chemical Markup Language
- PDB Protein Data Bank - Research Collaboratory for Structural Bioinformatics
- XYZ XYZ format, XMol file - Minnesota Supercomputer Institute
- XYZ+vib XYZ format with added vibrational vector information
- XYZ-FAH XYZ format for Folding@home
- MOL2 Sybyl, Tripos
- Alchemy Tripos
- CSF Fujitsu CAChe chemical structure, now Fujitsu Sygress
- GAMESS General Atomic and Molecular Electronic Structure System output (both US and UK variants) - Gordon Research Group, Iowa State University
- Gaussian Gaussian 94/98/03 output - Gaussian, Inc.
- Cube Gaussian, Inc.
- Ghemical The Ghemical computational chemistry package
- MM1GP Ghemical molecular mechanics file
- HIN HIN / HIV files from HyperChem - Hypercube, Inc.
- Jaguar Schrodinger, LLC
- MOLPRO Molpro output
- MOPAC MOPAC 93/97/2002 output (public domain)
- MGF MOPAC 2007 (v.7.101) graphf output (public domain)
- NWCHEM NWChem output - Pacific Northwest National Laboratory
- odydata Odyssey data - WaveFunction, Inc.
- xodydata Odyssey XML data - WaveFunction, Inc.
- QOUT Q-Chem, Inc.
- SHELX Structural Chemistry Department, University of Göttingen (Germany)
- SMOL Spartan data - Wavefunction, Inc.
- spinput Spartan data - Wavefunction, Inc.
- GRO Gromos87 format from GROMACS
- PQR Modified pdb format including charge and radius
- Amber The Amber package of molecular simulation programs
- JME Java Molecular Editor - Peter Ertl
- CASTEP The CASTEP software package, uses density functional theory
- FHI-aims Full-potential / all-electron electronic structure theory with local orbitals - Fritz-Haber-Institut der Max-Planck-Gesellschaft
- VASP VASP / VAMP / Vienna ab-initio simulation package
- DGrid Miroslav Kohout, Max-Planck Institute
- ADF ADF output - Amsterdam Density Functional
- XSD Accelrys Materials Studio
- AGL ArgusLab
- DFT Wien2k
- AMPAC AMPAC output - Semichem, Inc.
- WebMO WebMO interface to computational chemistry packages
- Molden Electron density / molecular orbitals
- PSI3 Output files from the PSI3 suite of quantum chemical programs
- CRYSTAL Output files from CRYSTAL, a computational tool for solid state chemistry and physics. Theoretical Chemistry Group, Univ. Torino, Italy.
$desktop = [Environment]::GetFolderPath("Desktop")
$shortcut = Join-Path $desktop 'Jmol.lnk'
if ([System.IO.File]::Exists($shortcut)) {
Write-Debug "Found the desktop shortcut. Deleting it..."
[System.IO.File]::Delete($shortcut)
}
md5: 060DA13179B1C1B098F65038029CB1D4 | sha1: C69C78AFF1CC5712879607DD7867F44150D972DD | sha256: 88FE2B73325A858B6CB30E70D68022A09EA31A72275C2DF8B2536A5563877903 | sha512: D171766F7EF5C1C1232D9982AC20342981E3BA180DC7D574CAA4C2038A5E269FE3AB14CE8DFAC96E780C58A19C9C72E731B8D7D7DF4A79551420DC62B5549C09
GNU LESSER GENERAL PUBLIC LICENSE
Version 3, 29 June 2007
Copyright (C) 2007 Free Software Foundation, Inc. <https://fsf.org/>
Everyone is permitted to copy and distribute verbatim copies
of this license document, but changing it is not allowed.
This version of the GNU Lesser General Public License incorporates
the terms and conditions of version 3 of the GNU General Public
License, supplemented by the additional permissions listed below.
0. Additional Definitions.
As used herein, "this License" refers to version 3 of the GNU Lesser
General Public License, and the "GNU GPL" refers to version 3 of the GNU
General Public License.
"The Library" refers to a covered work governed by this License,
other than an Application or a Combined Work as defined below.
An "Application" is any work that makes use of an interface provided
by the Library, but which is not otherwise based on the Library.
Defining a subclass of a class defined by the Library is deemed a mode
of using an interface provided by the Library.
A "Combined Work" is a work produced by combining or linking an
Application with the Library. The particular version of the Library
with which the Combined Work was made is also called the "Linked
Version".
The "Minimal Corresponding Source" for a Combined Work means the
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based on the Application, and not on the Linked Version.
The "Corresponding Application Code" for a Combined Work means the
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and utility programs needed for reproducing the Combined Work from the
Application, but excluding the System Libraries of the Combined Work.
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2. Conveying Modified Versions.
If you modify a copy of the Library, and, in your modifications, a
facility refers to a function or data to be supplied by an Application
that uses the facility (other than as an argument passed when the
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function or data, the facility still operates, and performs
whatever part of its purpose remains meaningful, or
b) under the GNU GPL, with none of the additional permissions of
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3. Object Code Incorporating Material from Library Header Files.
The object code form of an Application may incorporate material from
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(ten or fewer lines in length), you do both of the following:
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Library is used in it and that the Library and its use are
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b) Accompany the object code with a copy of the GNU GPL and this license
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4. Combined Works.
You may convey a Combined Work under terms of your choice that,
taken together, effectively do not restrict modification of the
portions of the Library contained in the Combined Work and reverse
engineering for debugging such modifications, if you also do each of
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these notices, as well as a reference directing the user to the
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d) Do one of the following:
0) Convey the Minimal Corresponding Source under the terms of this
License, and the Corresponding Application Code in a form
suitable for, and under terms that permit, the user to
recombine or relink the Application with a modified version of
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Corresponding Source.
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a copy of the Library already present on the user's computer
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e) Provide Installation Information, but only if you would otherwise
be required to provide such information under section 6 of the
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you use option 4d0, the Installation Information must accompany
the Minimal Corresponding Source and Corresponding Application
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Information in the manner specified by section 6 of the GNU GPL
for conveying Corresponding Source.)
5. Combined Libraries.
You may place library facilities that are a work based on the
Library side by side in a single library together with other library
facilities that are not Applications and are not covered by this
License, and convey such a combined library under terms of your
choice, if you do both of the following:
a) Accompany the combined library with a copy of the same work based
on the Library, uncombined with any other library facilities,
conveyed under the terms of this License.
b) Give prominent notice with the combined library that part of it
is a work based on the Library, and explaining where to find the
accompanying uncombined form of the same work.
6. Revised Versions of the GNU Lesser General Public License.
The Free Software Foundation may publish revised and/or new versions
of the GNU Lesser General Public License from time to time. Such new
versions will be similar in spirit to the present version, but may
differ in detail to address new problems or concerns.
Each version is given a distinguishing version number. If the
Library as you received it specifies that a certain numbered version
of the GNU Lesser General Public License "or any later version"
applies to it, you have the option of following the terms and
conditions either of that published version or of any later version
published by the Free Software Foundation. If the Library as you
received it does not specify a version number of the GNU Lesser
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whether future versions of the GNU Lesser General Public License shall
apply, that proxy's public statement of acceptance of any version is
permanent authorization for you to choose that version for the
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VERIFICATION
Verification is intended to assist the Chocolatey moderators and community
in verifying that this package's contents are trustworthy.
The installer is available from SourceForge:
https://sourceforge.net/projects/jmol/files/Jmol-<Latest Version>-binary.zip
Direct Download:
Version : 16.3.5
URL : https://sourceforge.net/projects/jmol/files/Jmol-16.3.5-binary.zip
CheckSum : 88FE2B73325A858B6CB30E70D68022A09EA31A72275C2DF8B2536A5563877903
Log in or click on link to see number of positives.
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In cases where actual malware is found, the packages are subject to removal. Software sometimes has false positives. Moderators do not necessarily validate the safety of the underlying software, only that a package retrieves software from the official distribution point and/or validate embedded software against official distribution point (where distribution rights allow redistribution).
Chocolatey Pro provides runtime protection from possible malware.
Add to Builder | Version | Downloads | Last Updated | Status |
---|---|---|---|---|
Jmol molecule viewer 16.3.5 | 53 | Thursday, November 14, 2024 | Approved | |
Jmol molecule viewer 16.3.1 | 166 | Thursday, October 24, 2024 | Approved | |
Jmol molecule viewer 16.2.37 | 68 | Tuesday, October 15, 2024 | Approved | |
Jmol molecule viewer 16.2.31 | 115 | Monday, September 23, 2024 | Approved | |
Jmol molecule viewer 16.2.25 | 625 | Monday, August 19, 2024 | Approved | |
Jmol molecule viewer 16.2.21 | 50 | Monday, August 5, 2024 | Approved | |
Jmol molecule viewer 16.2.17 | 95 | Friday, June 21, 2024 | Approved | |
Jmol molecule viewer 16.2.15 | 89 | Wednesday, May 8, 2024 | Approved | |
Jmol molecule viewer 16.2.5 | 69 | Tuesday, April 23, 2024 | Approved | |
Jmol molecule viewer 16.2.1 | 90 | Wednesday, April 10, 2024 | Approved | |
Jmol molecule viewer 16.1.63 | 506 | Wednesday, March 13, 2024 | Approved | |
Jmol molecule viewer 16.1.57 | 104 | Thursday, February 22, 2024 | Approved | |
Jmol molecule viewer 16.1.49 | 132 | Friday, January 26, 2024 | Approved | |
Jmol molecule viewer 16.1.47 | 147 | Monday, December 18, 2023 | Approved | |
Jmol molecule viewer 16.1.45 | 144 | Monday, November 13, 2023 | Approved | |
Jmol molecule viewer 16.1.43 | 140 | Saturday, October 28, 2023 | Approved | |
Jmol molecule viewer 16.1.41 | 750 | Tuesday, September 26, 2023 | Approved | |
Jmol molecule viewer 16.1.35 | 421 | Friday, August 25, 2023 | Approved | |
Jmol molecule viewer 16.1.31 | 487 | Saturday, August 5, 2023 | Approved | |
Jmol molecule viewer 16.1.13 | 376 | Friday, June 16, 2023 | Approved | |
Jmol molecule viewer 16.1.11 | 392 | Sunday, April 30, 2023 | Approved | |
Jmol molecule viewer 16.1.9 | 187 | Monday, April 3, 2023 | Approved | |
Jmol molecule viewer 16.1.5 | 196 | Saturday, February 18, 2023 | Approved | |
Jmol molecule viewer 14.32.83 | 195 | Sunday, January 8, 2023 | Approved | |
Jmol molecule viewer 14.32.82 | 565 | Friday, December 23, 2022 | Approved | |
Jmol molecule viewer 14.32.81 | 377 | Saturday, December 3, 2022 | Approved | |
Jmol molecule viewer 14.32.80 | 154 | Saturday, November 5, 2022 | Approved | |
Jmol molecule viewer 14.32.77 | 175 | Saturday, October 15, 2022 | Approved | |
Jmol molecule viewer 14.32.75 | 308 | Monday, September 26, 2022 | Approved | |
Jmol molecule viewer 14.32.73 | 758 | Tuesday, August 30, 2022 | Approved | |
Jmol molecule viewer 14.32.68 | 172 | Saturday, August 6, 2022 | Approved | |
Jmol molecule viewer 14.32.63 | 153 | Saturday, July 23, 2022 | Approved | |
Jmol molecule viewer 14.32.62 | 165 | Friday, July 8, 2022 | Approved | |
Jmol molecule viewer 14.32.60 | 216 | Friday, June 24, 2022 | Approved | |
Jmol molecule viewer 14.32.58 | 260 | Saturday, May 28, 2022 | Approved | |
Jmol molecule viewer 14.32.55 | 185 | Saturday, May 14, 2022 | Approved | |
Jmol molecule viewer 14.32.54 | 193 | Monday, May 2, 2022 | Approved | |
Jmol molecule viewer 14.32.50 | 199 | Tuesday, April 19, 2022 | Approved | |
Jmol molecule viewer 14.32.42 | 217 | Saturday, March 26, 2022 | Approved | |
Jmol molecule viewer 14.32.33 | 207 | Saturday, March 12, 2022 | Approved | |
Jmol molecule viewer 14.32.26 | 187 | Saturday, February 26, 2022 | Approved | |
Jmol molecule viewer 14.32.21 | 196 | Tuesday, February 15, 2022 | Approved | |
Jmol molecule viewer 14.32.17 | 187 | Wednesday, February 2, 2022 | Approved | |
Jmol molecule viewer 14.32.10 | 191 | Monday, January 10, 2022 | Approved | |
Jmol molecule viewer 14.32.6 | 204 | Wednesday, December 29, 2021 | Approved | |
Jmol molecule viewer 14.31.61 | 223 | Saturday, November 27, 2021 | Approved | |
Jmol molecule viewer 14.31.60 | 207 | Saturday, November 6, 2021 | Approved | |
Jmol molecule viewer 14.31.57 | 226 | Monday, October 18, 2021 | Approved | |
Jmol molecule viewer 14.31.53 | 250 | Wednesday, September 8, 2021 | Approved | |
Jmol molecule viewer 14.31.52 | 198 | Friday, August 20, 2021 | Approved | |
Jmol molecule viewer 14.31.49 | 237 | Saturday, August 7, 2021 | Approved | |
Jmol molecule viewer 14.31.48 | 132 | Sunday, August 1, 2021 | Approved | |
Jmol molecule viewer 14.31.44 | 290 | Monday, July 12, 2021 | Approved | |
Jmol molecule viewer 14.31.41 | 266 | Monday, May 31, 2021 | Approved | |
Jmol molecule viewer 14.31.38 | 250 | Saturday, May 15, 2021 | Approved | |
Jmol molecule viewer 14.31.36 | 263 | Sunday, April 18, 2021 | Approved | |
Jmol molecule viewer 14.31.35 | 276 | Monday, March 22, 2021 | Approved | |
Jmol molecule viewer 14.31.32 | 335 | Sunday, February 14, 2021 | Approved | |
Jmol molecule viewer 14.31.28 | 231 | Saturday, January 30, 2021 | Approved | |
Jmol molecule viewer 14.31.23 | 267 | Tuesday, January 12, 2021 | Approved | |
Jmol molecule viewer 14.31.20 | 253 | Sunday, December 27, 2020 | Approved | |
Jmol molecule viewer 14.31.18 | 270 | Friday, November 27, 2020 | Approved | |
Jmol molecule viewer 14.31.17 | 305 | Saturday, November 14, 2020 | Approved | |
Jmol molecule viewer 14.31.10 | 286 | Sunday, October 25, 2020 | Approved | |
Jmol molecule viewer 14.31.9 | 301 | Sunday, October 11, 2020 | Approved | |
Jmol molecule viewer 14.31.8 | 322 | Monday, September 28, 2020 | Approved | |
Jmol molecule viewer 14.31.4 | 346 | Saturday, September 12, 2020 | Approved | |
Jmol molecule viewer 14.31.3 | 316 | Sunday, August 30, 2020 | Approved | |
Jmol molecule viewer 14.31.2 | 355 | Sunday, July 19, 2020 | Approved | |
Jmol molecule viewer 14.31.0 | 353 | Wednesday, June 10, 2020 | Approved | |
Jmol molecule viewer 14.30.2 | 555 | Saturday, February 8, 2020 | Approved | |
Jmol molecule viewer 14.30.1 | 448 | Friday, December 20, 2019 | Approved | |
Jmol molecule viewer 14.29.54 | 578 | Saturday, October 12, 2019 | Approved | |
Jmol molecule viewer 14.29.53 | 435 | Saturday, September 28, 2019 | Approved | |
Jmol molecule viewer 14.29.52 | 1674 | Thursday, August 29, 2019 | Approved | |
Jmol molecule viewer 14.29.47 | 1988 | Wednesday, July 31, 2019 | Approved | |
Jmol molecule viewer 14.29.46 | 974 | Tuesday, June 18, 2019 | Approved | |
Jmol molecule viewer 14.29.42 | 7029 | Thursday, May 16, 2019 | Approved | |
Jmol molecule viewer 14.29.40 | 3605 | Tuesday, April 30, 2019 | Approved | |
Jmol molecule viewer 14.29.36 | 3881 | Sunday, April 14, 2019 | Approved | |
Jmol molecule viewer 14.29.34 | 944 | Thursday, April 11, 2019 | Approved | |
Jmol molecule viewer 14.29.31 | 8878 | Tuesday, March 5, 2019 | Approved | |
Jmol molecule viewer 14.29.29 | 5988 | Friday, November 30, 2018 | Approved | |
Jmol molecule viewer 14.29.28 | 497 | Thursday, November 1, 2018 | Approved | |
Jmol molecule viewer 14.29.26 | 414 | Friday, October 12, 2018 | Approved | |
Jmol molecule viewer 14.29.22 | 843 | Monday, September 17, 2018 | Approved | |
Jmol molecule viewer 14.29.17 | 9431 | Friday, June 22, 2018 | Approved | |
Jmol molecule viewer 14.29.16 | 470 | Friday, June 15, 2018 | Approved | |
Jmol molecule viewer 14.29.15 | 1707 | Monday, May 28, 2018 | Approved | |
Jmol molecule viewer 14.29.14 | 464 | Friday, May 18, 2018 | Approved | |
Jmol molecule viewer 14.29.13 | 4251 | Tuesday, April 24, 2018 | Approved | |
Jmol molecule viewer 14.29.12 | 3651 | Thursday, April 5, 2018 | Approved | |
Jmol molecule viewer 14.29.5 | 7190 | Monday, February 12, 2018 | Approved | |
Jmol molecule viewer 14.28.3 | 572 | Thursday, January 25, 2018 | Approved | |
Jmol molecule viewer 14.28.2 | 456 | Wednesday, January 17, 2018 | Approved | |
Jmol molecule viewer 14.27.2 | 612 | Friday, December 22, 2017 | Approved | |
Jmol molecule viewer 14.25.2 | 808 | Friday, December 1, 2017 | Approved | |
Jmol molecule viewer 14.21.1 | 586 | Tuesday, October 24, 2017 | Approved | |
Jmol molecule viewer 14.20.8 | 528 | Thursday, October 19, 2017 | Approved | |
Jmol molecule viewer 14.20.7 | 468 | Thursday, October 5, 2017 | Approved | |
Jmol molecule viewer 14.20.6 | 467 | Tuesday, September 19, 2017 | Approved | |
Jmol molecule viewer 14.20.5 | 935 | Friday, September 1, 2017 | Approved | |
Jmol molecule viewer 14.20.3 | 2507 | Tuesday, August 1, 2017 | Approved | |
Jmol molecule viewer 14.18.1 | 2468 | Monday, June 12, 2017 | Approved | |
Jmol molecule viewer 14.17.1 | 923 | Friday, June 2, 2017 | Approved | |
Jmol molecule viewer 14.15.2 | 2671 | Wednesday, May 3, 2017 | Approved | |
Jmol molecule viewer 14.9.1 | 2095 | Wednesday, March 8, 2017 | Approved | |
Jmol molecule viewer 14.8.0 | 1055 | Tuesday, January 31, 2017 | Approved | |
Jmol molecule viewer 14.6.1.20160811 | 1042 | Thursday, August 18, 2016 | Approved | |
Jmol 14.4.4 | 469 | Friday, April 22, 2016 | Approved |
Copyright © 1998-2016 The Jmol Development Team
-
- temurin11jre (≥ 11.0.0)
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