Downloads:

79,573

Downloads of v 14.4.4:

325

Last Update:

22 Apr 2016

Package Maintainer(s):

Software Author(s):

  • The Jmol Development Team

Tags:

jmol chemistry molecule image viewer java

Jmol

This is not the latest version of Jmol available.

14.4.4 | Updated: 22 Apr 2016

Downloads:

79,573

Downloads of v 14.4.4:

325

Maintainer(s):

Software Author(s):

  • The Jmol Development Team

Tags:

jmol chemistry molecule image viewer java

Jmol 14.4.4

This is not the latest version of Jmol available.

All Checks are Passing

2 Passing Test

Validation Testing Passed

Verification Testing Passed

Details

To install Jmol, run the following command from the command line or from PowerShell:

>

To upgrade Jmol, run the following command from the command line or from PowerShell:

>

To uninstall Jmol, run the following command from the command line or from PowerShell:

>

NOTE: This applies to both open source and commercial editions of Chocolatey.

1. Ensure you are set for organizational deployment

Please see the organizational deployment guide

  • Open Source or Commercial:
    • Proxy Repository - Create a proxy nuget repository on Nexus, Artifactory Pro, or a proxy Chocolatey repository on ProGet. Point your upstream to https://community.chocolatey.org/api/v2. Packages cache on first access automatically. Make sure your choco clients are using your proxy repository as a source and NOT the default community repository. See source command for more information.
    • You can also just download the package and push it to a repository Download

3. Enter your internal repository url

(this should look similar to https://community.chocolatey.org/api/v2)

4. Choose your deployment method:


choco upgrade jmol -y --source="'STEP 3 URL'" [other options]

See options you can pass to upgrade.

See best practices for scripting.

Add this to a PowerShell script or use a Batch script with tools and in places where you are calling directly to Chocolatey. If you are integrating, keep in mind enhanced exit codes.

If you do use a PowerShell script, use the following to ensure bad exit codes are shown as failures:


choco upgrade jmol -y --source="'STEP 3 URL'"
$exitCode = $LASTEXITCODE

Write-Verbose "Exit code was $exitCode"
$validExitCodes = @(0, 1605, 1614, 1641, 3010)
if ($validExitCodes -contains $exitCode) {
  Exit 0
}

Exit $exitCode


- name: Ensure jmol installed
  win_chocolatey:
    name: jmol
    state: present
    version: 14.4.4
    source: STEP 3 URL

See docs at https://docs.ansible.com/ansible/latest/modules/win_chocolatey_module.html.


chocolatey_package 'jmol' do
  action    :install
  version  '14.4.4'
  source   'STEP 3 URL'
end

See docs at https://docs.chef.io/resource_chocolatey_package.html.


Chocolatey::Ensure-Package
(
    Name: jmol,
    Version: 14.4.4,
    Source: STEP 3 URL
);

Requires Otter Chocolatey Extension. See docs at https://inedo.com/den/otter/chocolatey.


cChocoPackageInstaller jmol
{
   Name     = 'jmol'
   Ensure   = 'Present'
   Version  = '14.4.4'
   Source   = 'STEP 3 URL'
}

Requires cChoco DSC Resource. See docs at https://github.com/chocolatey/cChoco.


package { 'jmol':
  provider => 'chocolatey',
  ensure   => '14.4.4',
  source   => 'STEP 3 URL',
}

Requires Puppet Chocolatey Provider module. See docs at https://forge.puppet.com/puppetlabs/chocolatey.


salt '*' chocolatey.install jmol version="14.4.4" source="STEP 3 URL"

See docs at https://docs.saltstack.com/en/latest/ref/modules/all/salt.modules.chocolatey.html.

5. If applicable - Chocolatey configuration/installation

See infrastructure management matrix for Chocolatey configuration elements and examples.

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This package was approved by moderator doc on 25 Apr 2016.

Description

Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry.

tools\chocolateyInstall.ps1 
$packageName = 'jmol'
$url = 'http://sourceforge.net/projects/jmol/files/latest/download'
$scriptPath = $(Split-Path -parent $MyInvocation.MyCommand.Path)

Install-ChocolateyZipPackage $packageName $url $scriptPath

$JavaExe = 'C:\ProgramData\Oracle\Java\javapath\javaw.exe'
$target = (Get-ChildItem $scriptPath -filter jmol.jar -Recurse).fullname
$icon = Join-Path $scriptPath "Jmol_icon13.ico"
$launcher = Join-Path $scriptPath 'Jmol Launcher.exe'
$SG = Join-Path $env:ChocolateyInstall 'tools\shimgen.exe'

& $SG -o $launcher -p $JavaExe -c "-jar '$target'" -i $icon --gui

$shortcut = Join-Path ([Environment]::GetFolderPath("Desktop")) 'Jmol.lnk'

Install-ChocolateyShortcut -ShortcutFilePath $shortcut -TargetPath $launcher -IconLocation $icon
tools\chocolateyUninstall.ps1 
$desktop = $([Environment]::GetFolderPath([Environment+SpecialFolder]::DesktopDirectory))
$shortcut = Join-Path $desktop 'jmol.lnk'
 
if ([System.IO.File]::Exists($shortcut)) {
    Write-Debug "Found the desktop shortcut. Deleting it..."
    [System.IO.File]::Delete($shortcut)
}
tools\Jmol_icon13.ico

Log in or click on link to see number of positives.

In cases where actual malware is found, the packages are subject to removal. Software sometimes has false positives. Moderators do not necessarily validate the safety of the underlying software, only that a package retrieves software from the official distribution point and/or validate embedded software against official distribution point (where distribution rights allow redistribution).

Chocolatey Pro provides runtime protection from possible malware.

Version Downloads Last Updated Status
Jmol molecule viewer 14.31.35 134 Monday, March 22, 2021 Approved
Jmol molecule viewer 14.31.32 188 Sunday, February 14, 2021 Approved
Jmol molecule viewer 14.31.28 121 Saturday, January 30, 2021 Approved
Jmol molecule viewer 14.31.23 130 Tuesday, January 12, 2021 Approved
Jmol molecule viewer 14.31.20 115 Sunday, December 27, 2020 Approved
Jmol molecule viewer 14.31.18 138 Friday, November 27, 2020 Approved
Jmol molecule viewer 14.31.17 131 Saturday, November 14, 2020 Approved
Jmol molecule viewer 14.31.10 151 Sunday, October 25, 2020 Approved
Jmol molecule viewer 14.31.9 134 Sunday, October 11, 2020 Approved
Jmol molecule viewer 14.31.8 129 Monday, September 28, 2020 Approved
Discussion for the Jmol Package

Ground Rules:

  • This discussion is only about Jmol and the Jmol package. If you have feedback for Chocolatey, please contact the Google Group.
  • This discussion will carry over multiple versions. If you have a comment about a particular version, please note that in your comments.
  • The maintainers of this Chocolatey Package will be notified about new comments that are posted to this Disqus thread, however, it is NOT a guarantee that you will get a response. If you do not hear back from the maintainers after posting a message below, please follow up by using the link on the left side of this page or follow this link to contact maintainers. If you still hear nothing back, please follow the package triage process.
  • Tell us what you love about the package or Jmol, or tell us what needs improvement.
  • Share your experiences with the package, or extra configuration or gotchas that you've found.
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